opens the authoritative record at ENA, SRA or BioSample; this page never replaces it
unlisted_6
- 0 run(s)
derived from this sample's metadata and per-run QC
45,447
Reads
452
Observed features
4.568
Shannon
0.747
Evenness
452
Chao1
Where and when
- Collected
- None
- Depth
- not recorded
- Device
- not recorded
- Salinity
- not recorded
- Coordinates
- not recorded
- Platforms
- not recorded
Runs
none recorded
Per-run QC
- 16S identity
- n/a
- Q30
- n/a
- Region
- n/a
- Read length
- n/a
- PhiX
- n/a
- Adapter (worst)
- n/a
Most abundant features
- ASV_2186 · Incertae Sedis 3,099 (6.8%)
- ASV_2297 · Incertae Sedis 2,034 (4.5%)
- ASV_2408 · Incertae Sedis 1,839 (4.0%)
- ASV_2519 · Incertae Sedis 1,445 (3.2%)
- ASV_2583 · Incertae Sedis 1,429 (3.1%)
Read share of the five largest features in this sample.
Taxonomic composition
- Archaea 100.0%
- Thermoproteota 71.6%
- Halobacteriota 27.8%
- Methanobacteriota 0.4%
- Thermoplasmatota 0.2%
- Bathyarchaeia 71.5%
- Methanomicrobia 23.7%
- Methanosarcinia 4.0%
- Thermococci 0.4%
- Thermoplasmata 0.2%
- Nitrososphaeria 0.1%
- Incertae Sedis 71.5%
- Methanomicrobiales 23.7%
- Methanosarcinales 4.0%
- Methanofastidiosales 0.4%
- Methanomassiliicoccales 0.1%
- Nitrosopumilales 0.1%
- Marine Group II 0.0%
- Incertae Sedis 72.0%
- Rice Cluster II 23.1%
- Methanoperedenaceae 2.1%
- Methanosarcinaceae 1.4%
- Methanoregulaceae 0.6%
- Methanosaetaceae 0.5%
- Methanomassiliicoccaceae 0.1%
- everything else 0.1%
- Incertae Sedis 95.2%
- Candidatus Methanoperedens 2.1%
- Methanosarcina 1.4%
- Methanoregula 0.6%
- Methanothrix 0.5%
- Nitrosarchaeum 0.1%
- Candidatus Nitrosopumilus 0.0%
- uncultured archaeon 80.6%
- uncultured crenarchaeote 10.5%
- uncultured methanogenic archaeon 8.3%
- uncultured Methanomicrobiales archaeon 0.2%
- Methanosarcina sp. 0.2%
- uncultured euryarchaeote 0.1%
- uncultured bacterium 0.0%
Read share of the largest taxa at each rank, up to seven names per level. The dropdown switches level without reloading, so one page shows domain through species. Ranks are those assigned against SILVA 138.2 (SINTAX).
Similar samples
genus composition and metadata- closest composition
- closest composition
- closest composition
- closest composition
- closest composition
Nearest samples within this study by Bray-Curtis similarity of their genus composition.
Missing or wrong data?
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Figures computed from the released count table and per-run QC reports. The release itself is at https://huggingface.co/datasets/hmacgregor/ampliconflow-releases/resolve/main/PRJNA270841-20260926/.