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PRJEB69514
Pipeline 0.0.1 Contract v0.1 Licence CC-BY-4.0
14
Samples
14 runs
2.9k
Features
OTUs at 97%
313.2k
Reads
mapped total
565 KB
Release size
25 files
Reads per sample
log scale- min
- 17,887
- median
- 20,926
- max
- 41,149
Feature detection
100.0% non-zero2,869 / 2,869 features
Features with at least one observed read. The remainder are present in the reference set but not detected in these samples.
Composition
Top phyla
- Cyanobacteria 165,963 (53.0%)
- Proteobacteria 54,989 (17.6%)
- Actinobacteria 45,524 (14.5%)
- Bacteroidetes 34,028 (10.9%)
- Planctomycetes 9,036 (2.9%)
- Marinimicrobia_(SAR406_clade) 1,259 (0.4%)
- Verrucomicrobia 1,145 (0.4%)
- Firmicutes 752 (0.2%)
- Candidatus_Thermoplasmatota 542 (0.2%)
Top genera
- Prochlorococcus 161,008 (51.4%)
- Candidatus_Actinomarina 44,199 (14.1%)
- Candidatus_Pelagibacter 22,337 (7.1%)
- Polaribacter 8,407 (2.7%)
- Paracoccus 5,909 (1.9%)
- NS5_marine_group 5,901 (1.9%)
- Unknown 5,877 (1.9%)
- Aquibacter 4,326 (1.4%)
- Planctomycete 3,701 (1.2%)
- Bizionia 3,047 (1.0%)
- Neoasaia 2,928 (0.9%)
- Enterococcus 2,527 (0.8%)
- Phaeocystidibacter 2,498 (0.8%)
- AEGEAN-169_marine_group 2,472 (0.8%)
- SAR86_clade 1,988 (0.6%)
- Thalassococcus 1,713 (0.5%)
- Citreicella-Salipiger 1,543 (0.5%)
- Varunaivibrio 1,528 (0.5%)
- NS9_marine_group 1,342 (0.4%)
- Actinomarinicola 1,325 (0.4%)
Rank-abundance
log-log2,869 ranked features, top 200 shown. A steep drop means a few taxa carry most of the reads.
Per-sample reads
14 samples- min
- 17,887
- median
- 20,926
- max
- 41,149
Missing or wrong data?
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Downloads
8 files · sha256 in manifest- Count table (16S region unknown) 22 KB tables/PRJEB69514.16s-region-unknown.parquet
- Count table (16S V4) 4.7 KB tables/PRJEB69514.16s-v4.parquet
- Taxonomy 149 KB features.parquet
- Sample metadata 8.5 KB samples.parquet
- Run metadata 14 KB runs.parquet
- Sequences (fasta) 43 KB sequences/PRJEB69514.16s-region-unknown.fasta.gz
- Sequences (fasta) 7.2 KB sequences/PRJEB69514.16s-v4.fasta.gz
- Manifest manifest.json
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