opens the authoritative record at ENA, SRA or BioSample; this page never replaces it
SAMN33785634
MIGS Cultured Bacterial/Archaeal sample from Achromobacter insolitus
- 1 run(s)
- Illumina HiSeq 2500
- V4-V5
- present
derived from this sample's metadata and per-run QC
89,826
Reads
26
Observed features
3.143
Shannon
0.965
Evenness
26
Chao1
Where and when
- Collected
- 2021-07-28
- Depth
- not recorded
- Device
- not recorded
- Salinity
- not recorded
- Coordinates
- 43.04181, -70.71524
- Platforms
- Illumina HiSeq 2500
Runs
SRR23886410
Per-run QC
- 16S identity
- 99.0%
- Q30
- 92.2%
- Region
- V4-V5
- Read length
- 251 bp
- PhiX
- 0.0%
- Adapter (worst)
- 0.0%
Most abundant features
- ASV_1 · Achromobacter 6,662 (7.4%)
- ASV_12 · Achromobacter 5,475 (6.1%)
- ASV_23 · Achromobacter 5,193 (5.8%)
- ASV_34 · Achromobacter 4,933 (5.5%)
- ASV_45 · Achromobacter 4,632 (5.2%)
Read share of the five largest features in this sample.
Taxonomic composition
- Bacteria 100.0%
- Pseudomonadota 100.0%
- Gammaproteobacteria 100.0%
- Burkholderiales 100.0%
- Alcaligenaceae 100.0%
- Oxalobacteraceae 0.0%
- Achromobacter 100.0%
- Massilia 0.0%
- Achromobacter sp. 71.9%
- Azospirillum brasilense 28.1%
- uncultured Massilia sp. 0.0%
Read share of the largest taxa at each rank, up to seven names per level. The dropdown switches level without reloading, so one page shows domain through species. Ranks are those assigned against SILVA 138.2 (SINTAX).
Similar samples
genus composition and metadataNearest samples within this study by Bray-Curtis similarity of their genus composition.
Missing or wrong data?
Report a field that is empty or mistaken, or associate a paper with this study. No account is needed; the contact email is optional and used only to reply about this submission.
Figures computed from the released count table and per-run QC reports. The release itself is at https://huggingface.co/datasets/hmacgregor/ampliconflow-releases/resolve/main/PRJNA945462-20260926/.