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SAMN38047006
Wieselburg_LowP_NoResidues
- 1 run(s)
- Illumina MiSeq
- V4
- trimmed
- 0.1 m
- 2022
derived from this sample's metadata and per-run QC
10,026
Reads
410
Observed features
5.599
Shannon
0.931
Evenness
410
Chao1
Where and when
- Collected
- 2022-04
- Depth
- 0.1 m
- Device
- not recorded
- Salinity
- not recorded
- Coordinates
- 48.21589, 16.61836
- Platforms
- Illumina MiSeq
Runs
SRR26591409
Per-run QC
- 16S identity
- 94.8%
- Q30
- 94.9%
- Region
- V4
- Read length
- 253 bp
- PhiX
- 0.0%
- Adapter (worst)
- 0.0%
Most abundant features
- ASV_1 · Incertae Sedis 216 (2.2%)
- ASV_4482 · Incertae Sedis 214 (2.1%)
- ASV_5593 · Incertae Sedis 186 (1.9%)
- ASV_6704 · Incertae Sedis 131 (1.3%)
- ASV_7815 · Incertae Sedis 148 (1.5%)
Read share of the five largest features in this sample.
Taxonomic composition
- Bacteria 81.5%
- Archaea 18.5%
- Thermoproteota 18.5%
- Acidobacteriota 12.5%
- Pseudomonadota 12.1%
- Actinomycetota 12.0%
- Bacillota 11.9%
- Planctomycetota 8.3%
- Bacteroidota 7.6%
- everything else 17.2%
- Nitrososphaeria 18.5%
- Bacilli 11.3%
- Planctomycetes 7.6%
- Bacteroidia 7.6%
- Gammaproteobacteria 6.7%
- Verrucomicrobiia 6.6%
- Vicinamibacteria 6.2%
- everything else 35.6%
- Nitrososphaerales 18.5%
- Bacillales 8.6%
- Incertae Sedis 7.5%
- Vicinamibacterales 6.2%
- Pirellulales 5.4%
- Burkholderiales 3.6%
- Chitinophagales 3.6%
- everything else 46.6%
- Nitrososphaeraceae 18.5%
- Incertae Sedis 18.2%
- Bacillaceae 8.2%
- Pirellulaceae 5.4%
- Chitinophagaceae 3.5%
- Pedosphaeraceae 2.5%
- Paenibacillaceae 2.5%
- everything else 41.3%
- Incertae Sedis 54.5%
- Niallia 3.3%
- Candidatus Nitrososphaera 2.9%
- Peribacillus 2.3%
- Paenibacillus 2.2%
- Pirellula 1.8%
- Nitrospira 1.7%
- everything else 31.3%
- uncultured bacterium 53.1%
- uncultured archaeon 13.6%
- uncultured crenarchaeote 4.8%
- uncultured Acidobacteria bacterium 2.5%
- Bacillus huizhouensis 2.3%
- uncultured Bacillus sp. 2.2%
- Bacillus sp. (in: Bacteria) 1.7%
- everything else 19.7%
Read share of the largest taxa at each rank, up to seven names per level. The dropdown switches level without reloading, so one page shows domain through species. Ranks are those assigned against SILVA 138.2 (SINTAX).
Similar samples
genus composition and metadata- composition 95% similar (genus)
- shared: 0.1 m, Illumina MiSeq
- composition 94% similar (genus)
- same collection date
- shared: 0.1 m, 2022
- composition 94% similar (genus)
- same collection date
- shared: 0.1 m, 2022
- composition 93% similar (genus)
- same collection date
- shared: 0.1 m, 2022
- composition 93% similar (genus)
- same collection date
- shared: 0.1 m, 2022
Nearest samples within this study by Bray-Curtis similarity of their genus composition.
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Figures computed from the released count table and per-run QC reports. The release itself is at https://huggingface.co/datasets/hmacgregor/ampliconflow-releases/resolve/main/PRJNA1031540-20260926/.