opens the authoritative record at ENA, SRA or BioSample; this page never replaces it
SAMN38047007
Wieselburg_LowP_NoResidues
- 1 run(s)
- Illumina MiSeq
- V4
- trimmed
- 0.1 m
- 2022
derived from this sample's metadata and per-run QC
15,771
Reads
607
Observed features
6
Shannon
0.936
Evenness
607
Chao1
Where and when
- Collected
- 2022-04
- Depth
- 0.1 m
- Device
- not recorded
- Salinity
- not recorded
- Coordinates
- 48.21589, 16.61836
- Platforms
- Illumina MiSeq
Runs
SRR26591403
Per-run QC
- 16S identity
- 91.7%
- Q30
- 94.9%
- Region
- V4
- Read length
- 253 bp
- PhiX
- 0.0%
- Adapter (worst)
- 0.0%
Most abundant features
Read share of the five largest features in this sample.
Taxonomic composition
- Bacteria 83.3%
- Archaea 16.7%
- Thermoproteota 16.7%
- Acidobacteriota 12.3%
- Pseudomonadota 12.2%
- Actinomycetota 11.9%
- Bacillota 9.4%
- Bacteroidota 9.2%
- Planctomycetota 8.4%
- everything else 19.9%
- Nitrososphaeria 16.7%
- Bacteroidia 9.2%
- Bacilli 9.1%
- Planctomycetes 7.5%
- Verrucomicrobiia 7.3%
- Gammaproteobacteria 7.0%
- Vicinamibacteria 6.7%
- everything else 36.5%
- Nitrososphaerales 16.7%
- Incertae Sedis 7.7%
- Bacillales 6.7%
- Vicinamibacterales 6.6%
- Pirellulales 5.3%
- Burkholderiales 4.0%
- Chitinophagales 3.9%
- everything else 49.1%
- Incertae Sedis 19.0%
- Nitrososphaeraceae 16.7%
- Bacillaceae 6.5%
- Pirellulaceae 5.3%
- Chitinophagaceae 3.6%
- Chthoniobacteraceae 2.8%
- Pedosphaeraceae 2.4%
- everything else 43.6%
- Incertae Sedis 54.1%
- Candidatus Nitrososphaera 3.3%
- Niallia 2.2%
- Chthoniobacter 2.2%
- Paenibacillus 2.0%
- Peribacillus 1.7%
- Pir4 lineage 1.7%
- everything else 32.9%
- uncultured bacterium 50.5%
- uncultured archaeon 12.0%
- uncultured crenarchaeote 4.6%
- uncultured Acidobacteria bacterium 3.8%
- uncultured soil bacterium 2.1%
- metagenome 1.8%
- Bacillus sp. (in: Bacteria) 1.7%
- everything else 23.5%
Read share of the largest taxa at each rank, up to seven names per level. The dropdown switches level without reloading, so one page shows domain through species. Ranks are those assigned against SILVA 138.2 (SINTAX).
Similar samples
genus composition and metadata- composition 95% similar (genus)
- same collection date
- shared: 0.1 m, 2022
- composition 94% similar (genus)
- same collection date
- shared: 0.1 m, 2022
- composition 93% similar (genus)
- same collection date
- shared: 0.1 m, 2022
- composition 92% similar (genus)
- same collection date
- shared: 0.1 m, 2022
- composition 92% similar (genus)
- shared: 0.1 m, Illumina MiSeq
Nearest samples within this study by Bray-Curtis similarity of their genus composition.
Missing or wrong data?
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Figures computed from the released count table and per-run QC reports. The release itself is at https://huggingface.co/datasets/hmacgregor/ampliconflow-releases/resolve/main/PRJNA1031540-20260926/.