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SAMN38047012
Wieselburg_HighP_NoResidues
- 1 run(s)
- Illumina MiSeq
- V4
- trimmed
- 0.1 m
- 2022
derived from this sample's metadata and per-run QC
18,778
Reads
662
Observed features
5.993
Shannon
0.923
Evenness
662
Chao1
Where and when
- Collected
- 2022-04
- Depth
- 0.1 m
- Device
- not recorded
- Salinity
- not recorded
- Coordinates
- 48.21589, 16.61836
- Platforms
- Illumina MiSeq
Runs
SRR26591454
Per-run QC
- 16S identity
- 94.2%
- Q30
- 94.9%
- Region
- V4
- Read length
- 254 bp
- PhiX
- 0.0%
- Adapter (worst)
- 0.0%
Most abundant features
- ASV_1 · Incertae Sedis 339 (1.8%)
- ASV_4482 · Incertae Sedis 296 (1.6%)
- ASV_5593 · Incertae Sedis 256 (1.4%)
- ASV_6704 · Incertae Sedis 284 (1.5%)
- ASV_7815 · Incertae Sedis 255 (1.4%)
Read share of the five largest features in this sample.
Taxonomic composition
- Bacteria 82.3%
- Archaea 17.6%
- Thermoproteota 17.6%
- Acidobacteriota 14.2%
- Pseudomonadota 12.2%
- Actinomycetota 11.3%
- Bacillota 10.8%
- Verrucomicrobiota 7.8%
- Planctomycetota 6.8%
- everything else 19.2%
- Nitrososphaeria 17.6%
- Bacilli 10.1%
- Verrucomicrobiia 7.8%
- Vicinamibacteria 7.1%
- Bacteroidia 6.7%
- Actinobacteria 6.5%
- Gammaproteobacteria 6.5%
- everything else 37.5%
- Nitrososphaerales 17.6%
- Incertae Sedis 8.6%
- Bacillales 7.8%
- Vicinamibacterales 7.1%
- Pirellulales 4.2%
- Chthoniobacterales 3.9%
- Burkholderiales 3.7%
- everything else 47.0%
- Incertae Sedis 20.4%
- Nitrososphaeraceae 17.6%
- Bacillaceae 7.4%
- Pirellulaceae 4.2%
- Chthoniobacteraceae 3.0%
- Chitinophagaceae 2.9%
- Pedosphaeraceae 2.4%
- everything else 42.0%
- Incertae Sedis 55.3%
- Niallia 3.8%
- Candidatus Nitrososphaera 2.8%
- Chthoniobacter 2.5%
- Paenibacillus 1.8%
- Sphingomonas 1.6%
- Nitrospira 1.5%
- everything else 30.8%
- uncultured bacterium 52.1%
- uncultured archaeon 12.8%
- uncultured crenarchaeote 4.8%
- uncultured Acidobacteria bacterium 4.2%
- uncultured Bacillus sp. 3.3%
- uncultured soil bacterium 1.6%
- uncultured Bacteroidetes bacterium 1.5%
- everything else 19.6%
Read share of the largest taxa at each rank, up to seven names per level. The dropdown switches level without reloading, so one page shows domain through species. Ranks are those assigned against SILVA 138.2 (SINTAX).
Similar samples
genus composition and metadata- composition 94% similar (genus)
- same collection date
- shared: 0.1 m, 2022
- composition 93% similar (genus)
- same collection date
- shared: 0.1 m, 2022
- composition 92% similar (genus)
- same collection date
- shared: 0.1 m, 2022
- composition 91% similar (genus)
- shared: 0.1 m, Illumina MiSeq
- composition 91% similar (genus)
- shared: 0.1 m, Illumina MiSeq
Nearest samples within this study by Bray-Curtis similarity of their genus composition.
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Figures computed from the released count table and per-run QC reports. The release itself is at https://huggingface.co/datasets/hmacgregor/ampliconflow-releases/resolve/main/PRJNA1031540-20260926/.