opens the authoritative record at ENA, SRA or BioSample; this page never replaces it
SAMN38049511
Wieselburg_HighP_Residues
- 1 run(s)
- Illumina MiSeq
- V4
- trimmed
- 0.1 m
- 2021
derived from this sample's metadata and per-run QC
19,274
Reads
673
Observed features
6.084
Shannon
0.934
Evenness
673
Chao1
Where and when
- Collected
- 2021-10
- Depth
- 0.1 m
- Device
- not recorded
- Salinity
- not recorded
- Coordinates
- 48.21589, 16.61836
- Platforms
- Illumina MiSeq
Runs
SRR26596458
Per-run QC
- 16S identity
- 83.6%
- Q30
- 87.5%
- Region
- V4
- Read length
- 254 bp
- PhiX
- 0.0%
- Adapter (worst)
- 0.0%
Most abundant features
Read share of the five largest features in this sample.
Taxonomic composition
- Bacteria 86.0%
- Archaea 14.0%
- Actinomycetota 19.6%
- Pseudomonadota 15.7%
- Thermoproteota 14.0%
- Acidobacteriota 12.0%
- Planctomycetota 9.1%
- Bacillota 8.1%
- Chloroflexota 5.8%
- everything else 15.7%
- Nitrososphaeria 14.0%
- Actinobacteria 8.9%
- Planctomycetes 8.4%
- Alphaproteobacteria 8.2%
- Bacilli 7.8%
- Gammaproteobacteria 7.5%
- Vicinamibacteria 6.9%
- everything else 38.2%
- Nitrososphaerales 14.0%
- Incertae Sedis 8.1%
- Vicinamibacterales 6.9%
- Bacillales 5.7%
- Pirellulales 4.6%
- Gaiellales 4.0%
- Burkholderiales 3.9%
- everything else 52.9%
- Incertae Sedis 21.6%
- Nitrososphaeraceae 14.0%
- Bacillaceae 5.3%
- Pirellulaceae 4.6%
- Gemmataceae 2.7%
- Sphingomonadaceae 2.6%
- Chitinophagaceae 2.6%
- everything else 46.7%
- Incertae Sedis 54.7%
- Sphingomonas 2.4%
- Pirellula 2.3%
- Candidatus Nitrososphaera 1.9%
- Paenibacillus 1.6%
- Nocardioides 1.6%
- Niallia 1.6%
- everything else 34.0%
- uncultured bacterium 54.9%
- uncultured archaeon 10.4%
- uncultured crenarchaeote 3.7%
- uncultured Acidobacteria bacterium 3.6%
- metagenome 2.3%
- uncultured soil bacterium 1.8%
- Bacillus sp. (in: Bacteria) 1.4%
- everything else 22.0%
Read share of the largest taxa at each rank, up to seven names per level. The dropdown switches level without reloading, so one page shows domain through species. Ranks are those assigned against SILVA 138.2 (SINTAX).
Similar samples
genus composition and metadata- composition 96% similar (genus)
- same collection date
- shared: 0.1 m, 2021
- composition 95% similar (genus)
- same collection date
- shared: 0.1 m, 2021
- composition 94% similar (genus)
- same collection date
- shared: 0.1 m, 2021
- composition 94% similar (genus)
- same collection date
- shared: 0.1 m, 2021
- composition 92% similar (genus)
- same collection date
- shared: 0.1 m, 2021
Nearest samples within this study by Bray-Curtis similarity of their genus composition.
Missing or wrong data?
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Figures computed from the released count table and per-run QC reports. The release itself is at https://huggingface.co/datasets/hmacgregor/ampliconflow-releases/resolve/main/PRJNA1031540-20260926/.